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I need some clarification here.
How much time does she spend out in her pen?
How much exercise/one on one training time and fun does she get with you each day?
Does she sleep in the pen as well?
Does the barking only happen when she is in the pen?

More info is needed..and I agree with Tooney...punishing the barking without working out WHY she is barking (fear, excitement, barrier frustration, alarm barking etc) is not going to solve your problems.
 

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Okay.
One, she's a beagle mix...hounds are "announcers"..LOOK a dog! LOOK a person! LOOK a car! LOL.
I was recently working with a beagle who howls incessantly when someone is at the door. I used a clicker. The dog was allowed ONE bark/howl and then was clicked and rewarded (interrupting the bark and then rewarded..hard to bark when you are eating). Once the one bark, stop and look at me (waiting for the click/treat) was happening I started to delay the click..one second at a time. This is so the click and reward is now happening for the QUIET,not the initial bark itself. With time, the bark became a sort of permanent "one bark" signal. Then I added the "quiet" cue and click/treated. The idea is that (with practice and consistency on behalf of the owner) the dog will learn to alert them someone is at the door with one bark and then STOP.
It takes some time, but is much nicer than punishment and really reinforces the quiet cue..eventually you can preempt the bark completely (if you see the trigger coming) and have a dog that will not bark all the time.
 

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LOL..yeah hounds are a lot of work. Mine is a foxhound mix so I "get it"..but food really is your friend here.
It takes practice and timing, a hungry dog and a zillion little tiny pieces of REALLY stinky treats.

And any clicker will do. I like the "button" type rather than the "box type" clickers just because I find it easier to click..I always get my fingers stuck in the box.
 
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